Cell Cycle and Cell Division

Biology · Class 11

Simulation · Biology · Class 11

Prophase I, stage by stage

"Prophase I, stage by stage" is a free, interactive Class 11 Biology simulation for NEET, built on the NCERT section "Prophase I" in Cell Cycle and Cell Division. One homologous pair through leptotene → zygotene → pachytene → diplotene → diakinesis: synaptonemal complex zips up and dissolves, recombination nodules appear, chiasmata show then slide to the ends. NEET has asked about this idea 9 times in 10 years of papers.

From the lesson Prophase I in Cell Cycle and Cell Division. Change the values and watch what happens.

Prophase I, stage by stageBiology · Class 11

What it shows

NCERT §10.4.1

One homologous pair through leptotene → zygotene → pachytene → diplotene → diakinesis: synaptonemal complex zips up and dissolves, recombination nodules appear, chiasmata show then slide to the ends.

Controls

3 to try

  • Sliderprophase I progress 0–100 %
  • Toggleshow synaptonemal complex
  • Togglecondensation meter

Try this

Stop the slider at the first moment chiasmata become visible, and name what has already finished by then.

Common mistake

Crossing over in zygotene or diplotene; chiasmata are where crossing over is happening.

In NEET

10 years of papers

Asked 9 times in 10 years of NEET.

See the past questions: Cell Cycle and Cell Division (chapter)

The idea behind it

NCERT §10.4.1

  • Prophase I is longer and more complex than the prophase of mitosis. By how the chromosomes behave it is split into five stages, in order: leptotene, zygotene, pachytene, diplotene and diakinesis.
  • Leptotene: the chromosomes gradually become visible under the light microscope, and they keep compacting all through this stage.
  • Zygotene: homologous chromosomes begin to pair up, a process called synapsis. Electron micrographs show that synapsis comes with a complex structure, the synaptonemal complex.
  • Two homologues joined by synapsis form a bivalent, also called a tetrad; bivalents become clearer in the next stage. Leptotene and zygotene are short compared with pachytene.
  • Pachytene: the four chromatids of each bivalent become distinct and clearly appear as tetrads. Recombination nodules appear; these are the sites where crossing over happens between non-sister chromatids of the homologues.
  • Crossing over means homologous chromosomes swap pieces of genetic material. It is enzyme-mediated, the enzyme being recombinase, and it recombines the genetic material on the two chromosomes.
  • Recombination is finished by the end of pachytene, and the homologues stay linked at the crossover sites.
  • Diplotene begins when the synaptonemal complex dissolves. The recombined homologues of each bivalent tend to move apart, except where they crossed over; these X-shaped links are the chiasmata. In some vertebrates, an oocyte can stay in diplotene for months or even years.
  • Diakinesis, the last stage, is marked by terminalisation of the chiasmata. Condensation of the chromosomes is now complete, and the meiotic spindle is assembled to get the homologues ready to separate.
  • By the end of diakinesis the nucleolus has disappeared and the nuclear envelope has broken down; diakinesis is the transition into metaphase I.

Questions

4 answers

What does the "Prophase I, stage by stage" simulation show?
One homologous pair through leptotene → zygotene → pachytene → diplotene → diakinesis: synaptonemal complex zips up and dissolves, recombination nodules appear, chiasmata show then slide to the ends.
What mistake does the "Prophase I, stage by stage" simulation fix?
A common mistake it clears up: crossing over in zygotene or diplotene; chiasmata are where crossing over is happening.
Has NEET asked about this idea?
Yes. NEET has asked about this idea 9 times in 10 years of papers.
Is this simulation free?
Yes. It is free and runs in the browser on a phone or a laptop. It belongs to the lesson "Prophase I" in Cell Cycle and Cell Division (Class 11 Biology).

Embed this simulation

Free, with a link back

Teaching this idea? Put the simulation on your own page or LMS with this code.