Biomolecules

Biology · Class 11

Lesson 14 of 14 · 14 min

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Must-know facts

24 facts

  1. 01Living and non-living matter contain the same elements; living matter has relatively far more carbon and hydrogen.
  2. 02Tissue ground in trichloroacetic acid and filtered gives the acid-soluble pool (filtrate) and the acid-insoluble fraction (retentate).
  3. 03Wet weight, then dry weight after removing water, then ash after burning; ash holds inorganic elements such as calcium and magnesium.
  4. 04Alpha-amino acids: H, COOH, NH2 and an R group on the alpha carbon; 20 types in proteins; glycine (R = H), alanine (methyl), serine (hydroxy methyl).
  5. 05Acidic glutamic acid, basic lysine, neutral valine; aromatic tyrosine, phenylalanine, tryptophan; zwitterion depends on pH.
  6. 06Palmitic acid 16 C, arachidonic acid 20 C; glycerol is trihydroxy propane; lecithin is a membrane phospholipid.
  7. 07Nucleoside = base + sugar; nucleotide = base + sugar + phosphate.
  8. 08Adenine and guanine are purines; cytosine, thymine and uracil are pyrimidines.
  9. 09Acid-soluble pool: 18 to about 800 Da. Macromolecules except lipids: 10,000 Da and above. Micromolecules: under 1000 Da.
  10. 10Lipids come down in the insoluble fraction as membrane vesicles; they are not strictly macromolecules.
  11. 11Water is the most abundant chemical in cells (70–90% of cell mass); proteins 10–15%.
  12. 12Proteins are heteropolymers joined by peptide bonds; cellulose is a homopolymer of glucose; inulin is a polymer of fructose.
  13. 13Collagen is the most abundant protein in animals; RuBisCO is the most abundant in the biosphere.
  14. 14Starch helices hold iodine (blue); cellulose cannot. Glycogen is branched, reducing end on the right.
  15. 15Chitin of arthropod exoskeletons is a complex polysaccharide of amino-sugars.
  16. 16Four levels of protein structure; only right-handed helices; adult haemoglobin = 2 alpha + 2 beta subunits.
  17. 17Ribozymes are nucleic acids that act as enzymes.
  18. 18Most enzymes are damaged above about 40°C; thermophile enzymes stay active up to 80–90°C.
  19. 19Carbonic anhydrase: about 200 molecules of H2CO3 an hour without it, about 600,000 a second with it (about 10 million times faster).
  20. 20Enzymes lower activation energy; E + S ⇌ ES → EP → E + P.
  21. 21Velocity rises with substrate and plateaus at Vmax when all enzyme is occupied.
  22. 22Malonate competitively inhibits succinic dehydrogenase by resembling succinate.
  23. 23Six enzyme classes: oxidoreductases, transferases, hydrolases, lyases, isomerases, ligases.
  24. 24Co-factors: prosthetic group (haem in peroxidase and catalase), co-enzyme (NAD, NADP contain niacin), metal ion (zinc in carboxypeptidase).

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Key terms

23 terms

Acid-soluble pool
The filtrate left when tissue ground in trichloroacetic acid is strained; it holds the small molecules.
Acid-insoluble fraction
The retentate from the same filtration; it holds proteins, nucleic acids, polysaccharides and membrane lipids.
Ash
What remains after dried tissue is fully burnt; it contains inorganic elements such as calcium and magnesium.
Alpha-amino acid
An amino acid whose amino and carboxyl groups are on the same carbon, the alpha carbon.
Zwitterion
The form of an amino acid that carries both a positive and a negative charge at a particular pH.
Triglyceride
Glycerol with three fatty acids esterified to it; a fat or an oil.
Phospholipid
A lipid containing phosphorus and a phosphorylated organic compound, found in cell membranes; lecithin is one.
Nucleoside
A nitrogen base attached to a sugar.
Nucleotide
A nucleoside with a phosphate esterified to its sugar; the building block of nucleic acids.
Secondary metabolite
A compound of plants, fungi or microbes, such as an alkaloid or pigment, whose role in its host is often not fully known.
Heteropolymer
A polymer built from more than one type of monomer, such as a protein.
Homopolymer
A polymer of one type of monomer repeated many times, such as cellulose.
Primary structure
The sequence of amino acids in a protein, from the N-terminal to the C-terminal.
Tertiary structure
The folding of a whole protein chain on itself into a three-dimensional shape.
Quaternary structure
The arrangement of two or more folded polypeptide subunits relative to one another.
Ribozyme
A nucleic acid that acts as an enzyme.
Active site
The crevice or pocket in an enzyme into which the substrate fits.
Activation energy
The difference in energy between the substrate and the transition state; enzymes lower it.
Vmax
The maximum velocity of an enzyme reaction, reached when all enzyme molecules are occupied by substrate.
Competitive inhibitor
A substance resembling the substrate that competes for the active site, like malonate for succinic dehydrogenase.
Apoenzyme
The protein part of an enzyme that needs a co-factor to be active.
Prosthetic group
An organic co-factor tightly bound to the apoenzyme, such as haem in catalase.
Co-enzyme
An organic co-factor that binds only briefly during catalysis and serves many enzymes, such as NAD.
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Biomolecules Revision Notes | Class 11 Biology NCERT